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Sliceomatic

Version 1.1.0.1

by Eric Ludlam

Volume slice visualization gui

GUI for manipulating slices and isosurfaces over a volume.Control over color transparency, contours, and rendering techniques via menus.Original sliceomatic 1.0 for older versions of MATLAB is in the

Interactive viewer of 3 orthogonal slices of 3D volume.

Simple interactive viewer of 3 orthogonal slices of 3D volume and of sequence of volumes. The interaction is performed by mouse left button or keyboard arrows.

Slicer

Version 1.0.3.0

by David Legland

GUI for exploration of 3D images (stacks)

Solid object reconstructed from slice images in parallel planes.

Often three dimensional objects need to be reconstructed from planar images that are taken from slices in destructive testing. This sometimes requires the manual selecting of control points, but in

Viewer3D

Version 12.1.0.0

by Dirk-Jan Kroon

MIP, Color, Slice and Shaded 3D (shearwarp) Volume Rendering, interactive 3D view/measurement GUI

This function can be used to interactively view any kind of 2D,3D and 4D image volumes like CT and MRI. Allowing segmentation and distance measurements or ROI selection in 2D slices.It includes

imshow3D

Version 1.6.1.0

by Maysam Shahedi

imshow3D:(3D imshow) Displays 3D images slice by slice.Intensity adjusting & slice browsing by mouse

imshow3D displays 3D grayscale or RGB images in a slice by slice fashion with mouse-based slice browsing and window and level adjustment control, and auto slice browsing control.Usage:imshow3D (

slice stl files and create continuous contour along the slices

This contains the matlab files to slice a stl file and create a continuous contour along which the machine can move for deposition for 3D printing. The main file is slice_stl_create.mThe supporting

imshow3Dfull

Version 2.5.1.0

by Maysam Shahedi

imshow3Dfull displays 3D images slice by slice in 3 orthogonal views, with mouse control

imshow3Dfull is an extended version of imshow3D. It displays 3D grayscale or RGB images from three perpendicular views(i.e. axial, sagittal, and coronal) in slice by slice fashion with mouse based

A minimal "slicer" for the exploration of 3-D volumes using mouse interaction

The code includes a minimalistic software for interactive exploration of 3-D volumes. Its key feature is that the slices may be moved using the mouse pointer. Minimalistic means that it does not

Laser Cut Slicer in MATLAB / Porsche 917K

Laser Cut Slicer in MATLAB / Porsche 917KThis MATLAB code helps you to realize a 3d object with stacked laser cut plates:Extract the intersection of a 3d STL object and a cut plane, visualize, and

qMRLab

Version 2.4.1

by Agah Karakuzu

Quantitative Magnetic Resonance Imaging Made Easy with qMRLab: Use GUI or CLI to fit and simulate a myriad of qMRI models.

Examples to get started with MATLAB and Simulink for RoboNation competitions

image3

Version 1.2.0.0

by Anders Brun

Renders a 2-D image in 3-D space using a texture mapped rectangle, with several examples of uses.

includes:imagesc3, a scaled version of image3slice3, display slices fast from 3-D volume databox3, display a box from 3-D volume datascatterim2, make a 2-D scatter plot using imagesI originally created this code to

This function will draw multiple MR images in 3D space using DICOM header information

The three-dimensional viewing of MRI images can help understand the position of (double) oblique slices as often used in cardiac MRI. The function returns a figure handle which can be used as input

ExtractSlice extracts an arbitrary slice, both intensities and indices, from a given volume.

ExtractSlice extracts an arbitrary slice, both intensities and indices, from the input volume given the center and normal of the slice. If you are familiar with IDL, this is the equivalent function

MTT

Version 1.0.0.0

by Andrews Cordolino Sobral

Matlab Tensor Tools

Transform 3D STL file (StereoLithography) into 2D series BMP files.

Slicing_project.m file w/ matlab. 2. Run it/F5. Enjoy it. ========================================GUI troubleshooting ========================[step 1] Open GUIDE under ("new/App/GUIDE").[step 2] Open 'Slicing

CONN

Version 24.07.29

by Alfonso Nieto-Castanon

functional connectivity analyses of resting-state or task-based neuroimaging data; CONN toolbox, development version

Solve multiple systems of linear equations of the same size

sliceDelaunay

Version 1.1.0.0

by Pariterre

Slice a Delaunay mesh

sliceDelaunay.m returns the cross-section points of a plane for a delaunay triangulation meshing.

IsoSlicer

Version 1.0.3.0

by Ahmet Cecen

A GUI to help create transparent 3D isosurface maps of volumetric data.

IsoSlicer is a MATLAB GUI to help create a 3D equivelent of a contourplot for volumetric data. The product is a figure with a series of overlayed transparent iso-layers created using the MATLAB

Quickly and easily create 2d and 3d plots of fMRI data.

Inverse every 2D slice for an arbitrary N-D array (M).

Inverse every 2D matrix slice (the first two dimensions) for multi-dimensional array M: M(:,:,p,q,...) * X(:,:,p,q,...) = repmat(eye(m),[1,1,p,q,...]),where input M is a N-D array (m x m x [p x q x

xplor

Version 1.0.0

by Tony Delobel

Multi-Dimensional Data Visualization

Read a series of dicom slice images to a 3D volume image and meta data.

This function reads all good dicom files in a given directory and outputs a volume image. The slices are sorted by the SliceLocation tag in the image header. If no directory is specified, it opens

For MATLAB 7 or later. Returns actual coordinates of polygons representing contour lines ....

than one, contour altitude(s)If v is a scalar:[xc,yc] = Column vectors containing the NaN-delimited polygon(s) defining the contour slice at altitude vIf v is a vector:[xc,yc] = Cell arrays of column

Create a GUI to interactively investigate 3D-matrices with volume slice planes.

INTERACTIVESLICE is a handle class to interactively display volume slice planes of any 3D scalar field.

IMAGE BIT PLANE SLICING

IMAGE BIT PLANE SLICING

convertion of image to black and white image using slicing image without background.

convertion of image to black and white image using slicing image without background.we have to inter two thresholdvalues for doing that...

GIBBON: The Geometry and Image-Based Bioengineering add-ON for MATLAB

Here you find an excellent result abou the concept of "Gray Level Slicing"

Image Enhancement is one of the fundamental concept for the learners, here i gave my support with program for the better understanding of the concept called "Gray Level Slicing" one of the "Point

A package provides basic geometry processing functionality

Medical software for Processing multi-Parametric images Pipelines

3D Cube Slice

Version 1.0.0.1

by Oren Rosen

Enables reading 2 dim slices of 3 dim matrix stored in MAT file

This project demonstrates a simple example of extracting a 2-dim slice of a 3-dim matrix stored in a MAT file without needing to read in the entire MAT file. This may be useful when the full 3-dim

Equivalent ellipsoid from 3D image

Network Slicing Optimization for WSN

Analized, High Reliability Slice (e.g., for critical sensors)Low Latency Slice (e.g., for urgent data)Energy Efficient Slice (e.g., for battery-saving)

Import and export Darknet™ models within MATLAB deep learning networks.

matGeom

Version 1.2.8

by David Legland

A collection of functions for 2D and 3D geometric computing (intersections, distance...) on various shapes: polygons, meshes, ellipsoids...

SphericalHough detects spherical structures from 3D images - determines object center and radius

Experiments of reconstruction using Fourier Slice Theorem (rather than filtered back projection).

Direct Fourier Reconstruction of a Tomographic SliceExperiments of reconstruction using Fourier Slice Theorem (rather than filtered back projection, FBP).The implementation reconstructs a tomographic

Pattern Recognition and Machine Learning Toolbox

The MATLAB programs in "MATLAB/Simulink for Digital Communication" authored by Won Y. Yang et. al

slicing image with background using 2 threshold values

slicing image with background using 2 threshold values

A set of tools for working with light field (aka plenoptic) imagery in Matlab

MVTec Halcon function mex-wrapper

WarpFactory is a numerical toolkit for analyzing warp drive spacetimes.

Functions to add a simple alternating rectilinear infill pattern and additional shell contours to outline slice data.

The main function is add_features.add_shell, add_infill and process_slice_data are supporting functions.plot_slices is used to visualise the results.It is recommended to use other functions to

neuropoly/axonseg

Version 3.0.0.0

by Aldo Zaimi

AxonSeg is a GUI that performs axon and myelin segmentation on histology images.

MNI2FS: High Resolution Surface Rendering of MNI Space Volumes

Some tools for geostatistical analysis

Diffusion MRI, DTI, Fiber Tracking, Diffusion Tensor Calculation, Fiber Visualization

Segmentation, Measurement and Visualisation of Nuclear Envelope of HeLa Cells observed with Electron Microscope

neighbouring slices are further combined to improve the final results.Comparison with a hand-segmented ground truth reported Jaccard similarity values between 94-98% onthe central slices with a decrease towards

MatGemini

Version 5.6.0

by scivision

Core Matlab scripts for Gemini

This code enables measurements of CT MTF and NPS from images of an ACR accreditation phantom.

data directory to be selected in which there are only two subdirectories containing only CT slices corresponding to the third module of the phantom. Be careful of partial volume effects with surrounding

Least squares approximation of 1D data using free-knots spline

Variational Bayesian Monte Carlo (VBMC) algorithm for Bayesian posterior and model inference in MATLAB

GUI for visualization of data volumes via slices, contour lines, isosurfaces, and animation.

displays scalar 3-D datasets, essentially functions of three variables, by means of static and animated slices (the latter can be saved as movies), contour slices, and iso-surfaces.The main differences

PlotSpectrogram

Version 1.1.0.0

by Peter Kabal

This program plots spectrograms (intensities versus frequencies, plotted against time).

This program plots spectrograms (vertical slices of intensities versus frequencies, with slices plotted against time). PlotSpectrogram is designed for ease of use. Features:• Intensities are in log

watermarking of 3d images in dicom format

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