How can I plot for number of CT slices contain tumour in 3D if I have centre pixel location for tumour within diagnosis?

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I have number of slices of CT lung contain tumour through them and I want to plot these slices in 3D in order to the tumour be clear especially I have the centre pixel location of tumour in each slice, the thickness between the slices, volume, diameter and pixel spacing. Is that possible and what is code for? thank you
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Walter Roberson
Walter Roberson on 29 Jan 2017
Are these reconstructed slices, or the raw CT data that needs to be reconstructed? The wording you use would tend to suggest they are the already reconstructed slices.
Amera Al-funjan
Amera Al-funjan on 29 Jan 2017
I have CT images from public data and have their diagnosis by 4 radiologists measured the tumor >3mm like(volume, diameter and location of center pixel tumor.

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Answers (1)

Walter Roberson
Walter Roberson on 29 Jan 2017
You should look at isosurface() and slice(). You should also look in the File Exchange at vol3d v2.

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