forming a cell array from matrix

1 view (last 30 days)
FIR
FIR on 19 Nov 2011
I want to include the genes included in each cluster .
i have genedata =[1:1:100]
the code given below is for number of genes in cluster. Now i want to include the genes included
genedata=[1:1:100]
IDX = kmeans(genedata',20)
for i = 1:20
genenum(i) = sum(IDX == i);
end

Accepted Answer

Walter Roberson
Walter Roberson on 19 Nov 2011
First off, the loop you have is okay, but you could also replace it with the more efficient
genenum = accumarray(IDX(:));
As for including the genes included: you are not clear as to what you mean by that, so I will guess:
genes = cell(20,1);
for K = 1 : 20
genes{K} = genedata(IDX==K);
end
  3 Comments
FIR
FIR on 21 Nov 2011
thanks andrei
FIR
FIR on 21 Nov 2011
andrei if i do yhe following operation i get error
Error using ==> horzcat
CAT arguments dimensions are not consistent.
Error in ==> v at 10
fix=[j genenum genes]
where j=[1:20]'
please help

Sign in to comment.

More Answers (0)

Categories

Find more on Creating and Concatenating Matrices in Help Center and File Exchange

Tags

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!