Unrecognized function or variable 'ApOPs'.
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I am trying to make Oligopaint library (OligoLego-Github based) using intersected oligprobes generated from OligoMiner for bacteril genome contig.Please suggest me what should i edit in the program commands
I encountered one error- Unrecognized function or variable 'ApOPs'.)
The appendting text was
(%% Call AppToMSBS
LoadRegionsFolder='C:\MATLAB\';
LoadBarcodesFolder='C:\MATLAB\StreetsLatest\';
SaveFolder=LoadRegionsFolder;
ApOPs('MS',[LoadRegionsFolder,'5_MS_Output.bed'],'BS'...
,[LoadRegionsFolder,'5_BS_Output.bed'],'Toes'...
,[LoadBarcodesFolder,'Toes_V1.txt'],...
'Streets',[LoadBarcodesFolder,'Streets_V1.txt'],...
'PTable',[LoadBarcodesFolder,'PenaltyTable_V1.txt'],...
'SavePath',SaveFolder,'MaxAvoid','0')%,'SameUniversal',[LoadRegionsFolder,'Universal.txt']);
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Answers (3)
Image Analyst
on 23 Nov 2022
You don't have ApOPs on the search path. What folder does it live in? Let's say it's 'C:\MATLAB\Oligopaint' Then add this to the beginning of your code
addpath(genpath('C:\MATLAB\Oligopaint'));
savepath;
3 Comments
Image Analyst
on 23 Nov 2022
Again, the function readtextfile() is not on the search path. Find it and add it to the path.
Walter Roberson
on 23 Nov 2022
No, readtextfile() is on the path. But the file name in MSPath cannot be found (at least not under that name). It appears you are providing 'MS' as the complete file name.
[LoadRegionsFolder,'5_BS_Output.bed'],
We recommend that you use
fullfile(LoadRegionsFolder,'5_BS_Output.bed'),
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