3,988 results

Volume slice visualization gui

GUI for manipulating slices and isosurfaces over a volume.Control over color transparency, contours, and rendering techniques via menus.Original sliceomatic 1.0 for older versions of MATLAB is in the

3D volume viz with interactive slice selection, colored ortho-planes, windowing, colormap selection.

This tool provides an interactive 3D volume visualization. The function accepts as arguments any 3D matrix (of type double or uint8) and optional colormap, and displays a 2x2 figure of the 3

Source code files which go with the series of videos on volume visualization from Doug's Blog.

These are the source code files which generate the figures displayed in the volume visualization video series recently presented on Doug's Blog. These files are divided into cells which roughly

Voxelized volume visualization for 3D and 3D RGB arrays

VOXview is an easy-to-use function for visualizing small 3D scalar or RGB (i.e. MxNxO x3) arrays. This function was specifically designed to give the user independent control of voxel alpha

Visualize single- or multi-modal 2D or 3D images and corresponding segmentation

It can visualize single- or multi-modal 2D or 3D images in a selected plane, which can be switched.Modalities are switched by left slider, slices are changed by botom slider. Planes are switched by

4D (3D+1) volume visualization with windowing, custom colormaps, and component selection

A tool for visualizing vector-valued volumetric data, which has become more common recently in medical imaging (e.g., 3D + time, multi-modal acquisition). The function accepts a 4D matrix, allowing

MIP, Color, Slice and Shaded 3D (shearwarp) Volume Rendering, interactive 3D view/measurement GUI

Maximum intensity projections (MIP), Volume Rendering (VR) , Slice render, and colored and Phong shaded Volume rendering.Voxel opacity and color tables can be changed on the fly allowing also iso surface

Produce a 3D quiver of arrows with many visualization options

This quiver3D differs from the basic quiver3 in that it allows far more options for visualization. Based on the 'surf' command, you can produce color-based visuals of your data via the multiple

This tool helps to visualizes color volume by constructing a 3D gamut(s) given point cloud of color values.

This tool helps to visualizes color volume by constructing a 3D gamut(s) given point cloud of color values.Please visit GitHub page (https://github.com/QiuJueqin/Yet-Another-Color-Gamut-Visualizer

GUI to open most Medical file-formats: Dicom, V3D, ISI, NifTI, Analyze and other formats

Lab ( .gipl ) HDR/IMG Analyze ( .hdr ) ISI Files ( .isi ) NifTi ( .nii ) RAW files ( .raw , .* ) VMP BrainVoyager ( .vmp ) XIF HDllab/ATL ultrasound ( .xif ) VTK Visualization

GUI for visualization of data volumes via slices, contour lines, isosurfaces, and animation.

This is release 1.03 of the Volume Browser, a simplified version of the 3-D volume viewer "V3D" written by Robert Barsch and available from the Matlab File Exchange, File ID 2255.If you already have

Volume Visualization and slicing

(translations and rotations) through a friendly user interface. It also visualizes the loaded volumes with planes indicates the slices positions and orientations with respect to the volume.Multiple slices can

This programs calculate and visualize the dice similarity (volume overlap) of 2D binary images.

This is a GUI for visualizing volume data. Includes rendering volumes, displaying isosurfaces.

Includes different types of visualization of three-dimensional array (volumetric data):1. Orthogonal slices - each slice individually, as well as three orthogonal slices on one plot2. Rendered volume

An app for the easy visualization of volume data ( 4D )

This is an interactive tool that helps with volume data visualization such as during the studies of fluid flow, electrical or electro magnetic fields etc. It contains its own built-in help.Data can

Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis

Test if 3d points are inside a mesh. Or, voxelise a mask from a surface. Mesh can be non-convex too!

gridded query points rather than an N-by-3 array of points. X, Y, and Z coordinates of the grid supplied in XVEC, YVEC, and ZVEC respectively. IN will return as a 3D logical volume with SIZE(IN) =

Open-source multi-dimensional tomographic reconstruction software for MATLAB, GNU Octave and Python

Cytoarchitecture linked to gene expression to study multilevel human brain organization

user-defined candidate gene list between two user-defined volumes of interest (Julich-Brain maps or other volume of interest in MNI152 reference space [3]). The tool downloads expression values via the Allen

SoundVolume sets or gets the computer system's speaker sound volume, using Java

SoundVolume sets or gets the computer's system speaker sound volume Syntax: volume = SoundVolume(volume); SoundVolume(volume) sets the system speaker sound volume. The volume value should be

Computes the minimum-volume covering ellipoid that encloses N points in a D-dimensional space.

[A , c] = MinVolEllipse(P, tolerance)Finds the minimum volume enclosing ellipsoid (MVEE) of a set of data points stored in matrix P. The following optimization problem is solved: minimize

This is to visualize the functions of 3 variables: z=f(x,y,t), which becomes 4 dimensional problem

This is to visualize the functions of 3 independent variables ( v=f(x,y,z) ), which becomes 4 dimensional problem.It just uses the MATLAB function "slice", in an effective way, leading to

3-d volume (voxel) rendering

ASL Viewer visualize peak time map from 4D volume data (time-sequential 3D) of ASL (arterial spin labeling).

Turns thin surfaces into closed solids by adding a flat base or offsetting by a given thickness.

specify the X and Y spacing between grid points. SURF2SOLID(...,'PropertyName',VALUE,...) makes a solid volume from thin surface using any of the following property/value options: ELEVATION - Extends

Volume Render GUI with mouse change able color and alpha maps

This is a Fast Volume Render application, using OpenGL surfaces. Color and alpha maps can be changed on the fly by dragging and creating markers in a histogram with the mouse.Note:There is a bug /

Create a GUI to interactively investigate 3D-matrices with volume slice planes.

INTERACTIVESLICE is a handle class to interactively display volume slice planes of any 3D scalar field.

Given a surface triangulation, compute the volume enclosed using divergence theorem.

Given a surface triangulation, compute the volume enclosed using divergence theorem. Assumption:Triangle nodes are ordered correctly, i.e.,computed normal is outwardsInput: p: (3xnPoints), t

Export a variety of inputs (patch, surface) to an STL triangular mesh

volume tmpvol(8:12,8:12,5:15) = 1; % Turn some voxels on fv = isosurface(~tmpvol, 0.5); % Make patch w. faces "out" stlwrite('test.stl',fv) % Save to binary .stl Example 2

Exports 2D/3D image volume, vector field, surface, lines, polygons, etc. to ParaView

Paraview is a powerful open-source software for visualization of large 3D dataset. It offers more options, details and much better performance than built-in Matlab 3D visualization modules. This

Converts a single image (microscopy, topogrpahy) into array of images.

Function for creating a volume (array of images) representing topography from a single image.topog=im2topography(afm_im,N,A);N - number of depths levels to describe. The larger N - more slices

Two dimensional (2D) conservative shallow water equations solved using a finite volume method

Volumetric visualization of bone (or other tissue) density distribution from DICOM

(like bone)- Tridimensional smooth of the volume- Visualization of the data in 3D view

The function VISLABELS is used to visualize the output of BWLABEL.

VISLABELS is used to visualize the output of BWLABEL. VISLABELS(L), where L is a label matrix returned by BWLABEL, displays each object's label number on top of the object itself. Note: VISLABELS

3D Volumetric fMRI visualization

visualizations of brain imaging data. Volumetric easily allows layering and displaying multiple channels of data. It features Volumetric rendering which allows for transparent solids that change color and

Enable custom workflows for labeling volumes and isosurfaces in your MATLAB app.

app.https://www.mathworks.com/help/images/ref/volumeviewer-app.htmlWidgets provided in this toolbox include:Image Stack / Volume Visualization and Annotation LabelingIsosurface Visualization and Annotation LabelingSlice Plane (X/Y/Z) visualizationAdditionally included are

Plot a 3D matrix as a semitransparent volume

Note: This function does not yet work for Matlab 2014b or later. This function plots a 3D data volume as color-scaled semitransparent surface planes in each

Volume explorer tool by 3 orthogonal slices

Orthogonalslicer creates 3 figures showing the 3 orthogonal slices from a scalar volume of data. Cross lines on each image represents lines of intersection of the appropriate plane and the two other

gramm is a powerful and full-featured plotting and visualization toolbox similar to ggplot2 or seaborn

Exchange](https://www.mathworks.com/matlabcentral/images/matlab-file-exchange.svg)](https://mathworks.com/matlabcentral/fileexchange/54465-gramm-data-visualization-toolbox)Gramm is a MATLAB toolbox that enables the rapid creation of complex, publication-quality figures. Its design philosophy focuses on a *declarative* approach, where users specify the desired end result, as

Compute the overlap volume between 2 spheres defined in an array

Compute the overlap volume between 2 spheres defined in an array.Computation is vectorized, and intersection volume are computed ananalytical way.Input: spheres data presented in an array G of four

This function transforms a volume by using an affine transformation matrix.

This function transforms volume 'old_im' by means of affine transformation matrix 'M'. The output volume can be sub- and oversampled. The function makes use of interp3, so 'nearest', 'linear

Volume rendering app in MATLAB to visualize gray scale and labeled volume data.

Checkout the README of the project on GitLab: https://gitlab.com/tim.vandelooverbosch/volume_rendering_appFeatures:Simultaneous volume rendering of both gray scale and labeled volume dataLabeled data

A tool for visualizing phasor (voltage, current, impedance), along with animation.

Create a wind visualization

This is an example of how to create wind flow visualization in MATLAB^®.Read about the "isosurface", "isonormals", "isocaps", "coneplot", "streamline", "patch", and "reducepatch" functions in the

Convert a volume defined by a surface to a binary 3D block.

Easy to use, GUI based tool to capture, analyze, validate, postprocess, visualize and simulate PIV data.http://PIVlab.de

A simple yet general purpose FVM solver for transient convection diffusion PDE

FVTool: Finite volume toolbox for MatlabTiny Documents 📘.FVTool in:Python: PyFVToolJulia: JFVM.jlFVToolThis is a finite volume (toy) toolbox for chemical/petroleum engineers.Right now, it can solve

Compute intersections of lines, planes, volumes, etc. in arbitrary dimensions.

App for exploring higher dimensional data using volumetric visualizations and animation.

This app provides an interactive environment to explore four and five dimensional data using some of MATLAB's abilities for volumetric visualization and animation. It was originally designed for data

Compute volume and area of triangulation using divergence theorem of Gauss

Computes the VOLUME and AREA of a closed surface defined by the triangulation in indices TRI and coordinates X, Y and Z, using the divergence theorem of Gauss (volume/surface integral). The unit of

Adaptive Lagrangian Digital Volume Correlation - volumetric displacement and strain measurement based on a hybrid local-global approach

Augmented Lagrangian Digital Volume Correlation (ALDVC): volumetric displacement and strain measurement based on a hybrid local-global approach. ALDVC is a fast, parallel-computing hybrid DVC

Volume of a (hyper)sphere, sphere cap, or any band through a sphere defined by two parallel planes

This tool computes the volume inside a sphere in n dimensions, or inside a sphere cap, or inside any part of a sphere that can be defined by two parallel slicing planes. Compute the volume of a unit

Open Volume Controdoes open in Windows the volume control.

>> opensoundcontrol does check if the machine is running Windows and opens the Windows Volume Control Dialog. It's an easy way to open the Volume control to modify the loudness of Windows Sound

Read a series of dicom slice images to a 3D volume image and meta data.

This function reads all good dicom files in a given directory and outputs a volume image. The slices are sorted by the SliceLocation tag in the image header. If no directory is specified, it opens

Flow Cytometry Data Reader and Visualization Example

This includes a function to read in the standard flow cytometry FCS format data and examples of how to visualize the data.

Intensity normalization of Brain volume given a reference volume

This software adjust the intensity levels of a NIfti file containing a brain according to a reference volume.The two algorithms are based on Nyul et al. 2007 and Hellier 2009.It contains a nifti

Programs that solve the compressibility factor (by MOSS iteration) and molar volume, and pressure of a substance at the given state

(iterative) approach. Then the molar volume is solved. The second program solves for the pressure. The input data required for the 1st program are Pressure, Temperature, Critical Pressure and Temperature (if

ExtractSlice extracts an arbitrary slice, both intensities and indices, from a given volume.

ExtractSlice extracts an arbitrary slice, both intensities and indices, from the input volume given the center and normal of the slice. If you are familiar with IDL, this is the equivalent function

Use MATLAB Mobile™ to complete end-to-end quantitative analysis and visualization sharing of running data

, altitude, etc.). The data is then uploaded to MATLAB Drive (e.g., the default 'MobileSensorData' directory). An automated script then quantitatively analyzes the running data, generates visualizations, and

Displays 3 orthogonal slices from a 3D volume with optional overlay.

overlayVolume interactively shows three orthogonal slices from a 3D volume, with optional overlay. Display ranges, colormaps, transparency and the pixelsize can be changed.Volumes of interest can be