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HPC cluster with exceed on demand visualization tool

Asked by Aishwarya Venkatesh on 23 Jul 2019
Latest activity Answered by Sahithi Kanumarlapudi on 5 Aug 2019
Hi all,
I am working with fitrgp function in matlab and doing some computations for large datasets. The computation time is really too much(parfor doesnot seems to be helping much). So i have installed HPC cluster with exceed on demand as visualization tool. But the question is how to do job submission in HPC cluster for the scripts written in matlab, in order to reduce the computational time? It would be great, if you guys could give some suggestions.
Thanks a lot in advance!!!!

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1 Answer

Answer by Sahithi Kanumarlapudi on 5 Aug 2019

If your matlab code is in the file myScript.m, you might use a job submissions script like:
#!/bin/bash
#SBATCH -t 2:00
#SBATCH -N 1
#SBATCH -n 12
#SBATCH -mem-per-cpu 1024
#SBATCH -L matlab
. ~/.profile
module load matlab
matlab -nodisplay -nosplash -r "run('myScript.m'); exit" > myScript.out

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