Dr. Soumya Banerjee
Harvard University
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https://sites.google.com/site/neelsoumya/ Professional Interests: Biocomputing, machine learning, bioinformatics, complex systems, mathematical modelling, big data, computational biology, biologically inspired computing, complex systems
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Feeds
Submitted
Samples from gamma and Wishart
Test and draw samples from a gamma distribution and a Wishart distribution
mer än 5 år ago | 1 download |
Submitted
Generic function to perform logistic regression using elastic net regularization
Generic function to perform logistic regression using elastic net regularization
ungefär 6 år ago | 1 download |
Submitted
Example MATLAB script to plot ROC curve for different classification algorithms
Example MATLAB script to plot ROC curve and compute AUC for 4 different classification algorithms
mer än 6 år ago | 1 download |
Submitted
A generic function that uses a Generalized Linear Model (GLM) with factors
A generic function that uses a Generalized Linear Model (GLM) with factors
mer än 6 år ago | 1 download |
Submitted
Function to compute Fisher's p-value for meta-analysis
Function to compute Fisher's p-value for meta-analysis.
mer än 6 år ago | 5 downloads |
Submitted
Generic function and example code for using neural networks
Generic function and example code for using neural networks for prediction.
mer än 6 år ago | 1 download |
Submitted
Generic example code and generic function for random forests
example code and generic function for random forests (checks out of bag errors and leaf size)
nästan 7 år ago | 4 downloads |
Submitted
Simple example and generic function for SVM binary classifier for general matrix
Simple generic function that takes two labelled classes and trains SVM classifier (general matrix).
nästan 7 år ago | 1 download |
Submitted
Simple example and generic function for SVM binary classifier
Simple generic function that takes two labelled classes and trains SVM classifier.
nästan 7 år ago | 3 downloads |
Submitted
Simple example code and generic function for random forests
Simple example code and generic function for random forests (checks out of bag errors)
mer än 7 år ago | 8 downloads |
Submitted
Function to plot co-ordinates from a file on a map
Code to load co-ordinate data from a file and call function to plot co-ordinates on a map.
ungefär 8 år ago | 1 download |
Submitted
Generic function and example code for performing LASSO on GLM
Generic function and example code for performing LASSO on GLM and using it for prediction
mer än 8 år ago | 1 download |
Submitted
Generic function for LASSO on logistic regression
Generic function and example code for LASSO on logistic regression.
mer än 8 år ago | 1 download |
Submitted
Simple example and generic function to perform PCA
Simple example and generic function to perform PCA(principle components analysis)
nästan 9 år ago | 2 downloads |
Submitted
Example code and generic function to perform LASSO on GLM
Generic function to perform LASSO on generalized linear model (GLM).
nästan 9 år ago | 1 download |
Submitted
Function to perform Bayesian LASSO
Function to perform Bayesian LASSO (least absolute shrinkage and selection operator)
ungefär 9 år ago | 1 download |
Submitted
Simple MATLAB example code and generic function to perform LASSO
Simple MATLAB example code and generic function to perform LASSO
mer än 9 år ago | 4 downloads |
Submitted
Bash script to compile MATLAB code in each directory
Iterative matlab compiler: this has Bash scripts to compile MATLAB code in each directory
mer än 9 år ago | 1 download |
Submitted
Scripts to run MATLAB on cluster using bsub
This is a set of scripts to run MATLAB in batch mode on the cluster using bsub
mer än 9 år ago | 4 downloads |
Submitted
Simple example and generic function for kmeans clustering
Simple generic function and example to perform kmeans clustering
mer än 9 år ago | 1 download |
Submitted
Bayesian Linear Regression
This is a set of MATLAB functions to do Bayesian linear regression
mer än 9 år ago | 7 downloads |
Submitted
Graphical User Interface for Solving Ordinary Differential Equations for In-Vitro Infection
A graphical user interface to solve a set of ordinary differential equations (in-vitro infection)
mer än 9 år ago | 1 download |
Submitted
Wilcoxon rank-sum test and box plots for genes/compounds etc in healthy vs. disease
Does a Wilcoxon rank-sum test and creates box plot for genes etc in healthy vs. disease individuals
mer än 9 år ago | 4 downloads |
Submitted
t-test and box plots for genes/compounds etc in healthy vs. disease
Does a t-test and creates box plots for genes/compounds in healthy vs. disease individuals
mer än 9 år ago | 1 download |
Submitted
healthy_disease_boxplot.zip
Box plots of measured quantity in healthy vs. disease in two cohorts
mer än 9 år ago | 1 download |
Submitted
Linear regression for multiple category data with different slopes for each
The function does OLS and RMA regression on data that is categorized into two different categories
nästan 10 år ago | 2 downloads |
Submitted
Linear regression with statistics for multiple category data
This function does linear regression with statistics for multiple category data (OLS and RMA)
mer än 11 år ago | 1 download |
Submitted
A Graphical User Interface for Solving Delay Differential Equations and doing Local Search
A GUI for solving a set of delay differential equations (DDEs) and local search for best solutions
nästan 12 år ago | 1 download |
Submitted
Graphical User Interface for Solving Ordinary Differential Equations
A Graphical User Interface for Solving Ordinary Differential Equations (Immune Response Model)
mer än 12 år ago | 1 download |
Submitted
Linear regression on log transformed data
A function that takes two column vectors and does linear regression on the data
mer än 12 år ago | 2 downloads |