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scitran/client
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Client and utilities to allow interaction with the Flywheel SciTran API from the client side for search, get, put, and compute.
Cite As
Brian Wandell (2024). scitran/client (https://github.com/vistalab/scitran), GitHub. Retrieved .
Requires
MATLAB Release Compatibility
Platform Compatibility
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- Sciences > Neuroscience > Human Brain Mapping > MRI >
- Sciences > Neuroscience > Neuroinformatics >
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@bids
- bids
- checkSessions
- countSessions
- listDataFiles
- listMetaDataFiles
- listSubjectFolders
- metaDataFiles
- participants
- subjData
- subjFolders
- validate
@scitran
- analysisCreate
- analysisDelete
- analysisDownload
- analysisGet
- analysisUpload
- authAPIKey
- browser
- collectionCreate
- collectionDelete
- containerCreate
- containerDelete
- containerDownload
- containerGet
- containerSet
- containerType
- dataFileList
- dataFileModalityGet
- dataFileModalitySet
- dwiDownload
- exist
- fileDelete
- fileDownload
- fileOverwrite
- fileRead
- fileUpload
- fwImportFolder
- gears
- groups
- help
- infoGet
- infoSet
- list
- lookup
- modalityCreate
- modalityDelete
- modalityReplace
- objectParse.m
- projectHierarchy
- projectID
- runFunction
- scitran
- search
- search2container
- siteConfig
- subjectGet
- toolboxClone
- toolboxGet
- toolboxInstall
- toolboxValidate
- verify
@stanalysis
@toolboxes
data
datashare
examples
- bidsDownload
- bidsUpload
- fw_Apricot6
- fw_FiberDemo.m
- SDKExamples.m
- s_copyProject.m
- s_copyProjectAchiasma.m
- s_copyProjectEMRI.m
- s_fwInstall.m
- s_sdkSearch.m
- s_stRorie2010.m
examples/ccPPI
scripts/analysis
scripts/data
- s_stContainerDownload.m
- s_stDiffusion.m
- s_stFileDownload.m
- s_stFileRead.m
- s_stFileUpload.m
- s_stFindSession.m
- s_stInfoCreate.m
- s_stT1Parameters.m
scripts/gari
- AFQ_FgToTck
- dr_fwAddSession2tmpCollection
- dr_fwCheckJobs
- dr_fwDownloadFileFromAnalysis
- dr_fwDownloadFileFromZip
- dr_fwDownloadFileFromZip
- dr_fwFileInfoWrite
- dr_fwFileName
- dr_fwFileUpload
- dr_fwLaunchJobs
- dr_fwObtainAcquMD
- dr_fwObtainFilteredAnalysis
- dr_fwObtainValues
- dr_fwOrganizeDataForUpload.m
- dr_fwReadDtFromAnalysisTable
- dr_fwsearch.m
- dr_fwSearchAcquAnalysis
- dr_fwSubjectInfoWrite
- dr_fwWriteMrtrixTck
- dr_mergeTables
- dr_readCollection
scripts/gari/repnan
scripts/graphics
scripts/lookup
scripts/reports
scripts/search
scripts/software
sdk/+flywheel
sdk/+flywheel/+api
- AcquisitionsApi
- AnalysesApi
- BatchApi
- BulkApi
- CallbacksApi
- CollectionsApi
- ContainersApi
- DataexplorerApi
- DefaultApi
- DevicesApi
- DimseApi
- FilesApi
- GearsApi
- GroupsApi
- JobsApi
- ModalitiesApi
- ProjectsApi
- ReportsApi
- RolesApi
- RulesApi
- SessionsApi
- SiteApi
- SubjectsApi
- UsersApi
- ViewsApi
sdk/+flywheel/+mixins
- AcquisitionMixin.m
- AnalysisMethods
- AnalysisMixin.m
- BatchMixin
- BatchProposalMixin
- CollectionMixin.m
- ContainerBase
- DownloadMethods
- FileMethods
- FileMixin
- GearInvocation
- GearMixin
- GroupMixin.m
- InfoMethods
- JobMixin
- NoteMethods
- PermissionMethods
- ProjectMixin.m
- ResolverOutputMixin
- SearchResponseMixin
- SessionMixin.m
- SubjectMixin.m
- TagMethods
- TimestampMethods
sdk/+flywheel/+model
- Acquisition.m
- AcquisitionMetadataInput
- AnalysisFilesCreateTicketOutput
- AnalysisInput
- AnalysisInputLegacy
- AnalysisListEntry.m
- AnalysisOutput.m
- AnalysisUpdate
- AuthLoginOutput
- AuthLoginStatus
- AuthLogoutOutput
- Avatars
- Batch.m
- BatchCancelOutput
- BatchJobsProposalInput
- BatchProposal.m
- BatchProposalDetail
- BatchProposalInput
- Body
- BulkMoveSessions
- CallbacksVirusScanInput
- ClassificationAddDelete
- ClassificationReplace
- ClassificationUpdateInput
- Collection.m
- CollectionNewOutput
- CollectionNode
- CollectionOperation
- CommonClassification
- CommonDeletedCount
- CommonEditions
- CommonInfo
- CommonKey
- CommonModifiedCount
- CommonObjectCreated
- ConfigAuthOutput
- ConfigFeatureMap
- ConfigOutput
- ConfigSiteConfigOutput
- ConfigSiteSettings
- ConfigSiteSettingsInput
- ContainerAcquisitionOutput.m
- ContainerAnalysisOutput.m
- ContainerCollectionOutput.m
- ContainerFileOutput.m
- ContainerGroupOutput.m
- ContainerNewOutput
- ContainerOutput
- ContainerOutputWithFiles
- ContainerParents
- ContainerProjectOutput.m
- ContainerReference
- ContainerSessionOutput.m
- ContainerSubjectOutput.m
- ContainerUidcheck
- ContainerUpdate
- DataView
- DataViewAnalysisFilterSpec
- DataViewColumnAlias
- DataViewColumnSpec
- DataViewFileSpec
- DataViewNameFilterSpec
- DataViewSaveDataViewInput
- DataViewZipFilterSpec
- Device
- DeviceStatus
- DeviceStatusEntry
- DimseProjectInput
- DimseProjectOutput
- DimseServiceInput
- DimseServiceOutput
- Download
- DownloadContainerFilter
- DownloadContainerFilterDefinition
- DownloadFilter
- DownloadFilterDefinition
- DownloadInput
- DownloadNode
- DownloadTicket
- DownloadTicketWithSummary
- EnginemetadataEngineUploadInput
- EnginemetadataLabelUploadInput
- EnginemetadataUidMatchUploadInput
- EnginemetadataUidUploadInput
- EnginemetadataUploadAcquisitionMetadataInput
- FileEntry.m
- FileOrigin
- FileReference
- FileVersionOutput
- FileVia
- FileZipEntry
- FileZipInfo
- Gear
- GearConfig
- GearContextLookup
- GearContextLookupItem
- GearCustom
- GearDirective
- GearDoc.m
- GearEnvironment
- GearExchange
- GearInfo
- GearInputItem
- GearInputs
- Group.m
- GroupMetadataInput
- GroupNewOutput
- InfoAddRemove
- InfoReplace
- InfoUpdateInput
- InlineResponse200
- InlineResponse2001
- InlineResponse2002
- InlineResponse2003
- InlineResponse2004
- InlineResponse2005
- Job.m
- JobAsk
- JobAskResponse
- JobAskReturn
- JobAskState
- JobAskStateResponse
- JobCompletionInput
- JobCompletionTicket
- JobConfig
- JobConfigInputs
- JobConfigOutput
- JobContainerDetail
- JobDestination
- JobDetail
- JobDetailFileEntry
- JobDetailInputsObject
- JobDetailParentInfo
- JobExecutorInfo
- JobGearMatch
- JobInputsArrayItem
- JobInputsItem
- JobInputsObject
- JobListEntry.m
- JobLog
- JobLogStatement
- JobOrigin
- JobProfile
- JobProfileInput
- JobRequest
- JobStateCounts
- JobStatsByState
- JobTransitionTimes
- JobVersionInfo
- LdapSync
- LdapSyncData
- LdapSyncInput
- LdapSyncLdapUser
- MasterSubjectCodeCodeOutput
- MasterSubjectCodeDobInput
- MasterSubjectCodeIdInput
- Modality
- Note
- Origin
- Packfile
- PackfileAcquisitionInput
- PackfilePackfileInput
- PackfileProjectInput
- PackfileSessionInput
- PackfileStart
- PermissionAccessPermission
- Project.m
- ProjectMetadataInput
- ProjectTemplateRequirement
- ProjectTemplateSessionTemplate
- Provider
- ProviderInput
- ProviderLinks
- ReportAccessLogContext
- ReportAccessLogContextEntry
- ReportAccessLogContextFileEntry
- ReportAccessLogEntry
- ReportAccessLogOrigin
- ReportDailyUsageEntry
- ReportDemographicsGrid
- ReportEthnicityGrid
- ReportGenderCount
- ReportGroupReport
- ReportLegacyUsageEntry
- ReportLegacyUsageProjectEntry
- ReportProject
- ReportSite
- ReportTimePeriod
- ReportUsageEntry
- ResolverAcquisitionNode.m
- ResolverAnalysisNode.m
- ResolverFileNode.m
- ResolverGearNode.m
- ResolverGroupNode.m
- ResolverInput
- ResolverNode
- ResolverOutput.m
- ResolverProjectNode.m
- ResolverSessionNode.m
- ResolverSubjectNode.m
- RolesBackwardsCompatibleRoleAssignment
- RolesGroupRolePoolInput
- RolesRole
- RolesRoleAssignment
- RolesRoleInput
- Rule
- RuleAny
- SearchAcquisitionResponse.m
- SearchAnalysisResponse.m
- SearchCollectionResponse.m
- SearchFileResponse.m
- SearchGroupResponse.m
- SearchMlInput
- SearchMlInputFile
- SearchParentAcquisition.m
- SearchParentAnalysis.m
- SearchParentCollection.m
- SearchParentGroup.m
- SearchParentProject.m
- SearchParentResponse
- SearchParentSession.m
- SearchParseError
- SearchParseSearchQueryResult
- SearchProjectResponse.m
- SearchQuery
- SearchQuerySuggestions
- SearchResponse.m
- SearchSaveSearch
- SearchSaveSearchInput
- SearchSaveSearchParent
- SearchSaveSearchUpdate
- SearchSessionResponse.m
- SearchStatus
- SearchStructuredSearchQuery
- SearchSubjectResponse.m
- SearchSuggestion
- Session.m
- SessionJobsOutput
- SessionMetadataInput
- SessionTemplateRecalcOutput
- SignedurlmetadataSignedUrlMetadataInput
- Subject.m
- SubjectMetadataInput
- Tag
- TreeContainerRequestSpec
- TreeGraph
- TreeGraphConnection
- TreeGraphConnections
- TreeGraphNode
- TreeRequest
- TreeResponseItem
- User
- UserApiKey
- UserJobsOutput
- UserPreferences
- UserWechat
- VersionOutput
- ViewerApp
sdk/+jsonio
utility
- formatSearchType
- gitRemovePath
- idGet
- notDefined
- sec2year
- stAcquisitionExists
- stContainerMove
- stContains
- stDir
- stDirCreate
- stDockerConfig
- stExamplesShow
- stFileParse
- stFileSelect
- stFWCreate
- stFWDirStruct
- stModel
- stNewGraphWin
- stObjectParse.m
- stObjectType
- stParamFormat
- stPrint
- stSearch2Container
- stSelect
- stSessionExists
- stSubjectInfo
- stType
- stValid
- year2sec
utility/deprecated
- installScitran.m
- stAnalysisCreate
- stCarraySlot
- stCSVcatcomma
- stCSVwrite
- stCurlRun
- stDockerCommand
- stParseSearch
- stPlink2Destination
- stProjectGet
- stSubjectGet
- workDirectory
utility/labels
utility/toolbox
validate
examples
examples/DEMO
- DEMO_ALDIT.mlx
- DEMO_CountSubjects.mlx
- DEMO_Docker_BET.mlx
- DEMO_ecog_RenderElectrodes.mlx
- DEMO_ProjectReports_Subject.mlx
- DEMO_Search.mlx
- DEMO_Session.mlx
examples/ccPPI
examples/simonsGroupAnalysis
scripts/gari/repnan
scripts/reports
scripts/software
Versions that use the GitHub default branch cannot be downloaded
Version | Published | Release Notes | |
---|---|---|---|
1.0.2.0 | Documentation |
|
|
1.0.1.0 | Documentation |
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