This package includes a variety of scripts for analysis of microscopy images, using the SAFIRE screening platform. This package is useful for analyzing high-content screens of intracellular bacteria. The package inputs images from an Olympus IX81 microscope running Slidebook, segments host cells, and quantifies intracellular bacteria. It applies B-score normalization to the resulting data.
Abigail Reens (2022). SAFIRE_Olympus_ix81 (https://www.mathworks.com/matlabcentral/fileexchange/61666-safire_olympus_ix81), MATLAB Central File Exchange. Retrieved .
MATLAB Release Compatibility
Platform CompatibilityWindows macOS Linux
Community Treasure Hunt
Find the treasures in MATLAB Central and discover how the community can help you!Start Hunting!