This package includes a variety of scripts for analysis of microscopy images, using the SAFIRE screening platform. This package is useful for analyzing high-content screens of intracellular bacteria. The package inputs images from an ArrayScan microscopy, segments host cells, and quantifies intracellular bacteria. It applies B-score normalization to the resulting data.
Abigail Reens (2022). SAFIRE_ArrayScan (https://www.mathworks.com/matlabcentral/fileexchange/61665-safire_arrayscan), MATLAB Central File Exchange. Retrieved .
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