This package analyzes 7 different properties of cell. It calculates number of cells in each image, size of each cell, staining intensity of each cell, morphology of each cell, spacing/clustering between cells, variation in signal intensity, signal to noise ration, evaluation of the dynamic range of the images.
READ THE MANUAL AND COMMENTS IN THE CODE.
Maybe I am missing something but the file JAS-20X-3-C2C12.jpg appears to be not part of the submission. I have read the 101 and it says you can replace the file but unless there is copyright issues I suggest you include it.
Added CCNY's logo!
Inspired by: Image Segmentation Tutorial