MetaboNetworks

A toolbox to interactively create, customize and explore multi-systemic metabolic reaction networks

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Cite As

Joram Posma (2026). MetaboNetworks (https://se.mathworks.com/matlabcentral/fileexchange/42684-metabonetworks), MATLAB Central File Exchange. Retrieved .

Acknowledgements

Inspired by: MatlabBGL

Categories

Find more on Genomics and Next Generation Sequencing in Help Center and MATLAB Answers

General Information

MATLAB Release Compatibility

  • Compatible with any release

Platform Compatibility

  • Windows
  • macOS
  • Linux
Version Published Release Notes Action
2.1.0

Updated functions GetRPData and GetRPData_Outer to reflect changes in KEGG. Added a new example data set.

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1.4.0

Fixed the error in OrganismFindGUI caused by a naming ambiguity in KEGG.
Added updated code for faster database generation and network layouts.

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1.3.0

2 new functionalities: edges linked to corresponding KEGG reaction pair web page, text edit option to change a specific string (e.g. 'hydroxy' to 'OH') for all nodes simultaneously. Search functions for selecting organisms/metabolites were updated.

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1.2.0

Fixed 2 errors in subfunctions of MetaboGetworks, added function descriptions of input and output variables.

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1.1.0

Removal of a parfor in the TextMatch code.

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1.0.0

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