General Viterbi Algorithm
This function runs Viterbi algorithm given valid parameters and returns optimal path into a file (ou
You are now following this Submission
- You will see updates in your followed content feed
- You may receive emails, depending on your communication preferences
General implementation of matlab version of Viterbi algorithm specifically written for gene structure finding problem in mind. However, it can be modified to suit the goal of a user.
Input:
Transition Probability Matrix
Emission Probability Matrix
Initial Probability Matrix
States Matrix (ie. Exon,Intron, Intergenic, etc.)
Sequence File Name <-- Optional
Output:
Most probable state sequence ('Path') into output.txt
Further Detail: http://en.wikipedia.org/wiki/Viterbi_algorithm
Cite As
Jacob Shin (2026). General Viterbi Algorithm (https://se.mathworks.com/matlabcentral/fileexchange/11050-general-viterbi-algorithm), MATLAB Central File Exchange. Retrieved .
General Information
- Version 1.0.0.0 (1.49 KB)
-
No License
MATLAB Release Compatibility
- Compatible with any release
Platform Compatibility
- Windows
- macOS
- Linux
| Version | Published | Release Notes | Action |
|---|---|---|---|
| 1.0.0.0 |
