Error bar with CI 95 on bar graph
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Hi,
Can anyone tell how to apply CI 95% error bars on grouped bar graph.
Thanks
6 Comments
Which part are you having trouble with?
Do you already have the CI bounds?
Are you unsure what function to use to plot the errorbars?
Do you have the CI bounds, know how to use errorbar() but are unsure how to center them over grouped bar plots?
If you have questions that this link doesn't address, please let us know where you're stuck.
Anum Ali
on 15 Nov 2019
Adam Danz
on 15 Nov 2019
Where is your bar plot in this code?
Anum Ali
on 15 Nov 2019
Anum Ali
on 15 Nov 2019
Answers (1)
Here's an anonymous function that computes the 95% CI based on the tinv method which requires that your data approximately form a normal distirbution. See this link for more information on this function.
% x is a vector, matrix, or any numeric array of data. NaNs are ignored.
% p is a the confident level (ie, 95 for 95% CI)
% The output is 1x2 vector showing the [lower,upper] interval values.
CIFcn = @(x,p)std(x(:),'omitnan')/sqrt(sum(~isnan(x(:)))) * tinv(abs([0,1]-(1-p/100)/2),sum(~isnan(x(:)))-1) + mean(x(:),'omitnan');
% Demo
% x = randn(100,1) + 5;
% p = 95;
% CI = CIFcn(x,p)
Here's a demo using your code
EE = [0.0363 0.0312 0.0274 0.0244 0.0220 0.0200 0.0183 0.0168 0.0155 0.0143];
CIFcn = @(x,p)std(x(:),'omitnan')/sqrt(sum(~isnan(x(:)))) * tinv(abs([0,1]-(1-p/100)/2),sum(~isnan(x(:)))-1) + mean(x(:),'omitnan');
CI = CIFcn(EE,96);
% Compute the distance of the upper and lower bounds
CIdist = abs(CI-mean(EE));
% plot
plot(1, mean(EE), 'bo')
hold on
errorbar(1, mean(EE), CIdist(1), CIdist(2))
ylim([0, .05])
grid on
4 Comments
In my answer, EE is a vector of values. The center point is the mean of EE which you can clearly see in my code.
Confidence intervals generally show the range of possible mean values from a distribution. In my answer, I'm only dealing with 1 vector, 1 distribution, 1 mean value, 1 confidence interval.
Now you can apply that to your data but first, I recommend taking a few minutes to understand what's going on in my answer.
In your data, EE is probably the means from several distribtions. You'll want to provide the raw data in the CIFcn function in order to compute the CI.
Anum Ali
on 15 Nov 2019
I couldn't possibly answer that without knowing what inputs you're providing.
I have no idea what your data look like. Are you provding the CIFcn() function a matrix? a vector? If you're providing a matrix and you'd like to compute the CIs for each column, you'll need to provide each column as input individually or rewrite the function.
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