Confusing documentation for analysis of variance (ANOVA)

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Reading the documentation for Matlab's repeated-measures ANOVA, I noticed two things that didn't make sense to me (I am reasonably literate in statistics):
1) In this example (the fisheriris dataset), "species" is taken as the predictor variable - however species is a between-subjects factor, not within-subjects!
2) The output of another example for a repeated measures ANOVA lists Group as a within-subjects factor when it too is clearly between-groups.
Also, why is it that all factors' names in that output table end in "time", e.g. "Group:Time"? Is that because most repeated measures are normally measurements done across time? This is really confusing.
Thanks for any help clarifying these points!

Answers (1)

David Resendes
David Resendes on 21 Apr 2017
RE (1): In this example , observations are irises. The measurement that can vary among different irises is its species, so it should be a predictor variable treated as a between-subjects factor. You seem to be saying that the example treats it as a within-subjects factor. Can you point to the place in the example where species is treated as a within-subjects factor?
RE (2): The link you provided doesn’t take me to another example. However, you might be referring to this example . In this example, the second sentence states that Group is a between-subjects factor, and it is treated as a between-subjects factor in the ANOVA table. Can you point me to the place in this example, or to another example, where a variable called Group is treated as a within-subjects factor?
RE your final question: The description of the first output argument of ranova states:
ranovatbl includes a term representing all differences across the within-subjects factors. This term has either the name of the within-subjects factor if specified while fitting the model, or the name Time if the name of the within-subjects factor is not specified while fitting the model or there are more than one within-subjects factors. ranovatbl also includes all interactions between the terms in the within-subject model and all between-subject model terms.
In this example, there are two within-subject factors, so Time is used as the variable’s name.
  1 Comment
z8080
z8080 on 1 Sep 2017
Sorry for the very late reply!
1) The example does treat is a between-subjects factor, but why I found that surprising is because the model itself that is fitted is not a between-subjects (or mixed) model, but a repeated measures (i.e., within-subjects) model.
Unfortunately I cannot access your links, as the website asks me for a licence number ("You are not associated with a license or a trial.To view the documentation for this product, associate to a license or contact sales. "), which I don't have, despite Matlab starting fine on my work PC (which I guess means our group's license is still valid).

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